Ask Question, Ask an Expert

+1-415-315-9853

info@mywordsolution.com

Ask Biology Expert

problem 1: For an alignment shown below derive log-odds score for the column 1 only by:

a) Computing observed probability values.

b) Expected probability values.

TAGCTT
AAGCTC
T-GGTT
TGGCAT
TACCTT

problem 2: Using 1st order models determine the probability of coding region in frame two for DNA fragment AGTAGCTTCCAG. Use only parameters provided in the homework solution. Show all of your work.

problem 3: For the zero order hidden Markov model determine probability of coding state at the last nucleotide of the sequence AGTAG. Use parameters provided in the homework solution. Show all of your work.

problem 4: p-value and e-value are used to assess the significance of the alignment. Can you think of additional ways of evaluating the strength of the alignment other than bit Score?

Biology, Academics

  • Category:- Biology
  • Reference No.:- M91349
  • Price:- $20

Priced at Now at $20, Verified Solution

  • AsyU replied

    Thank you so much for your help, you guys are really awesome. Your service is really good which help me alot... Thank you tutor for providing such a good and high quality solution of this problem...

Have any Question? 


Related Questions in Biology

In the following experiment students plated e coli top

In the following experiment, students plated E. coli (top right), S. epidermidis (top left), P. Aeruginosa (bottom right) and E. aerogenes (bottom left) on Trypticase soy agar (Yellow media), Glucose mineral salts agar ( ...

Part a answer each of the following questions in one or two

Part A: Answer each of the following questions in one or two paragraphs. 1. Create two Punnett squares to display the outcome of the Fl generation and F2 gener¬ation from one of Mendel's experiments with pea plants. Use ...

Discuss the following1think about how how the cellular

Discuss the following: 1. Think about how how the cellular processes of respiration and photosynthesis are opposite reactions. Now consider that, respiration releases that energy for cellular use. Photosynthesis uses lig ...

In this assignment you will be writing a 1000-1250-word

In this assignment, you will be writing a 1,000-1,250-word essay describing the differing approaches of nursing leaders and managers to issues in practice. To complete this assignment, do the following: nursing shortage ...

Recall that the biological species concept defines a

Recall that the biological species concept defines a species as a group of populations whose members have the potential to interbreed in nature and produce viable, fertile offspring. This means that all members of these ...

Assignmentmany mutations such as sickle cell anemia has mal

Assignment Many mutations such as sickle cell anemia has mal formed proteins. People with sickle cell trait are carriers of a defective hemoglobin S gene causes the RBC to be stiff and rough, what takes place is that the ...

Given the equation del g del h- t del s what is the effect

Given the equation del G= del H- T del S, what is the effect of temperature on the free energy of the nucleic acid structure if base stacking between base pairs in double stranded DNA is enthalpically driven and entropic ...

Which theoretical perspective that guides the nursing

Which theoretical perspective, that guides the nursing process with assessment of the family, do you find to be the most helpful and effective? Why is this theory more appealing to you than the others?

This sheet must only be turned in at the beginning of next

This sheet must only be turned in at the beginning of next lab. 1. Perform the conversions below: 12,581 mg = _______ kg   683; L = ______mL 5.8 m =________ mm;      6.3 s = _________ MS 2,250 mL = ______ L;      12 m = ...

Disscussion board biologybiotechnology allows the use of

Disscussion Board Biology Biotechnology allows the use of living organisms or their processes for human needs or purposes. Currently, this topic includes such general examples as cloning, stem cells (adult, umbilical cor ...

  • 4,153,160 Questions Asked
  • 13,132 Experts
  • 2,558,936 Questions Answered

Ask Experts for help!!

Looking for Assignment Help?

Start excelling in your Courses, Get help with Assignment

Write us your full requirement for evaluation and you will receive response within 20 minutes turnaround time.

Ask Now Help with Problems, Get a Best Answer

A cola-dispensing machine is set to dispense 9 ounces of

A cola-dispensing machine is set to dispense 9 ounces of cola per cup, with a standard deviation of 1.0 ounce. The manuf

What is marketingbullwhat is marketing think back to your

What is Marketing? • "What is marketing"? Think back to your impressions before you started this class versus how you

Question -your client david smith runs a small it

QUESTION - Your client, David Smith runs a small IT consulting business specialising in computer software and techno

Inspection of a random sample of 22 aircraft showed that 15

Inspection of a random sample of 22 aircraft showed that 15 needed repairs to fix a wiring problem that might compromise

Effective hrmquestionhow can an effective hrm system help

Effective HRM Question How can an effective HRM system help facilitate the achievement of an organization's strate